1. Xmipp
  2. Scipion
  3. UnwarpJ
  4. Wavelet bayesian denoising
  5. FluorescenceRatioJ (source code and help)
  6. DistanceMeterJ
  7. SynapseMeasuresJ (source code and help)
  8. CEUmass
  9. Analysis of the diffusion and cluster size of membrane receptors by fluorescence microscopy
  10. Sample size calculator for pilot studies