Publications

2019

 

2017

2016

2015

2014

2013

2012

    • Two-step demodulation based on Gram-Schmidt orthonormalization method
      J. Vargas, J.A. Quiroga, C.O.S. Sorzano, J.C. Estrada and J.M. Carazo
      Optics Letters. 2012;37:443-445
    • Image formation in cellular X-ray microscopy
      J. Otón, C.O.S. Sorzano, E. Pereiro, J. Cuenca, R. Navarro, R. Marabini and J.M. Carazo
      J. Structural Biology. 2012;178:29-37
    • Semiautomatic, high-throughput, high-resolution protocol for three-dimensional reconstruction of Single Particles in Electron Microscopy. Nanoimaging
      C.O.S.Sorzano, J.M.de la Rosa, J.Otón, J.Vega, J.Cuenca, A.Zaldívar-Peraza, J.Gómez-Blanco, J.Vargas, A.Quintana, R.Marabini and J.M.Carazo
      (Alioscka Sousa, Michael Kruhlak, Ed). 2012
    • Image processing for Ssingle-particle analysis of macromolecular complexes with electron micrographs
      Z. Devaux, C.O.S. Sorzano and S. Jonic
      . 2012
    • Epitope insertion at the N-terminal molecular switch of the rabbit hemorrhagic disease virus t=3 capsid protein leads to larger t=4 capsids
      Luque, D. and Gonzalez, J. M. and Gomez-Blanco, J. and Marabini, R. and Chichon, J. and Mena, I. and Angulo, I. and Carrascosa, J. L. and Verdaguer, N. and Trus, B. L. and Barcena, J. and Caston, J. R.
      J. Virol.. 2012;86:6470–6480
    • Integrating human and murine anatomical gene expression data for improved comparisons
      Jimenez-Lozano, Natalia; Segura, Joan; Ramon Macias, Jose
      Bioinformatics. 2012;28:397-402
    • Shack-Hartmann centroid detection using the spiral phase transform
      Vargas, J.; Restrepo, R.; Estrada, J. C.
      Applied Optics. 2012;51:7362-7367
    • Data management challenges in three-dimensional EM
      Patwardhan A, Carazo JM, Carragher B, Henderson R, Heymann JB, …, Sorzano CO, Sanz-García E, Scheres SH, …, Kleywegt GJ.
      Nature Structural Molecular Biology. 2012;19:1203-1207

2011

2010

2009

2008

    • Localization of the N-terminus of minor coat protein IIIa in the adenovirus capsid
      San Martín, C. and Glasgow, J.N. and Borovjagin, A. and Beatty, M.S. and Kashentseva, E.A. and Curiel, D.T. and Marabini, R. and Dmitriev, I.P.
      J. Mol. Biol.. 2008;383:923–934
    • An image processing approach to the simulation of atomic models for transmission electron microscopy of biological samples
      C.O.S. Sozano and C. Bebeaqua and R. Marabini and M. van Heel and J.M. Carazo
      . 2008
    • An image processing workflow for 3D reconstruction of biological samples improving achieved resolution by electron microscopy and single particle analisys
      C.O.S. Sozano and S. Jonic and S. Marco and R. Marabini and N. Boisset and J.M. Carazo
      . 2008
    • Comparison of single-particle analysis and electron tomography approaches: an overview
      Jonic, S. and Sorzano, C. O. S. and Boisset, N.
      J. Microscopy. 2008;232:562–579
    • Image processing for electron microscopy single-particle analysis using XMIPP
      Scheres, S. H. W. and Núñez-Ramírez, R. and Sorzano, C. O. S. and Carazo, J. M. and Marabini, R.
      Nature Protocols. 2008;3:977–990
    • Volumetric restrictions in 3DEM reconstruction
      Sorzano, C. O. S. and Velázquez-Muriel, J. A. and Marabini, R. and Herman, G. T. and Carazo, J. M.
      Pattern Recognition. 2008;41:616–626
    • Crystal structure of a near-full-length archaeal MCM: functional insights for an AAA+ hexameric helicase.
      Aaron S Brewster and Ganggang Wang and Xian Yu and William B Greenleaf and José María Carazo and Matthew Tjajadia and Michael G Klein and Xiaojiang S Chen
      Proc Natl Acad Sci U S A. 2008;105:20191–20196

2007

2006

    • Consistent and Elastic Registration of Histological Sections using vector-spline regularization
      I. Arganda-Carreras and C.O.S. Sorzano and R. Marabini and J.M. Carazo and C. Ortiz-de-Solorzano and J. Kybic
      Lect. Notes Comput. Sc.. 2006;4241:85-95
    • Algorithms for three-dimensional reconstruction from the imperfect projection data provided by electron microscopy In Electron Tomography
      J.M. Carazo and G.T. Herman and C.O.S. Sorzano and R. Marabini
      (J. Frank, Ed). 2006
    • Optimization Problems in Electron Microscopy of Single Particles
      Sorzano, C.O.S. and R. Marabini and Pascual-Montano, A. and Scheres, S.H.W. and Herman, G. T. and Carazo, J.M.
      Ann. Oper. Res.. 2006;148:133-165
    • Image Processing and 3-D Reconstruction in Electron Microscopy
      IEEE Signal Processing Magazine. 2006;23:84-94
    • Electron Tomography: Methods for Three-Dimensional Visualization of Structures in the Cell
      Carazo, J. M. and Herman, G. T. and Sorzano, C. O. S. and Marabini, R.
      (Frank, J., Ed). 2006:217–243
    • Improved Bayesian image denoising based on wavelets with applications to Electron Microscopy
      Sorzano, C. O. S. and Ortiz, E. and López, M. and Rodrigo, J.
      Pattern Recognition. 2006;39:1205–1213
    • On the nature of 2D crystal unbending.
      Debora Gil and Jose Maria Carazo and Roberto Marabini
      J Struct Biol. 2006;156:546–555
    • Quaternary polymorphism of replicative helicase G40P: structural mapping and domain rearrangement.
      Rafael Núñez-Ramírez and Yolanda Robledo and Pablo Mesa and Silvia Ayora and Juan Carlos Alonso and José María Carazo and Luis Enrique Donate
      J Mol Biol. 2006;357:1063–1076
    • Structural basis for the cooperative assembly of large T antigen on the origin of replication.
      Mikel Valle and Xiaojiang S Chen and Luis Enrique Donate and Ellen Fanning and José María Carazo
      J Mol Biol. 2006;357:1295–1305
    • Flexible fitting in 3D-EM guided by the structural variability of protein superfamilies.
      Javier-Angel Velazquez-Muriel and Mikel Valle and Alberto Santamaría-Pang and Ioannis A Kakadiaris and José-María Carazo
      Structure. 2006;14:1115–1126

2005